WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2b.1 Sequence Name  F45H7.2b.1
Length (nt)  4421   Chromosome Location  III: 3344873-3363415
Chromosome . Primary Identifier  III Chromosome Location . Start  3344873
Chromosome Location . End  3363415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2b F45H7.2b 4005   III: 3344875-3344977

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2b.1 3344873 3363415 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82772   105   III: 3344873-3344977 Caenorhabditis elegans
Exon82775   140   III: 3345048-3345187 Caenorhabditis elegans
Exon82778   128   III: 3345507-3345634 Caenorhabditis elegans
Exon82783   78   III: 3346018-3346095 Caenorhabditis elegans
Exon82787   70   III: 3346448-3346517 Caenorhabditis elegans
Exon82791   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82798   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82803   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82808   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82813   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82818   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82823   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82829   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82834   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82839   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82844   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82849   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82854   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82867   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82872   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82877   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82882   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82888   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82896   532   III: 3362884-3363415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2b.1 3344873 3363415 1

1 Sequence

Length
4421

1 Sequence Ontology Term

Identifier Name Description
transcript