WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2a.1 Sequence Name  F45H7.2a.1
Length (nt)  4960   Chromosome Location  III: 3344874-3363427
Chromosome . Primary Identifier  III Chromosome Location . Start  3344874
Chromosome Location . End  3363427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2a F45H7.2a 4533   III: 3344875-3344977

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2a.1 3344874 3363427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82810   104   III: 3344874-3344977 Caenorhabditis elegans
Exon82811   140   III: 3345048-3345187 Caenorhabditis elegans
Exon82814   128   III: 3345507-3345634 Caenorhabditis elegans
Exon82819   78   III: 3346018-3346095 Caenorhabditis elegans
Exon82823   70   III: 3346448-3346517 Caenorhabditis elegans
Exon82827   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82834   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82839   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82844   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82849   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82854   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82859   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82865   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82870   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82875   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82880   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82885   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82890   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82895   343   III: 3357924-3358266 Caenorhabditis elegans
Exon82899   185   III: 3358585-3358769 Caenorhabditis elegans
Exon82903   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82908   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82913   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82918   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82924   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82935   544   III: 3362884-3363427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2a.1 3344874 3363427 1

1 Sequence

Length
4960

1 Sequence Ontology Term

Identifier Name Description
transcript