WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45H7.2d.2 Sequence Name  F45H7.2d.2
Length (nt)  4262   Chromosome Location  III: 3345918-3363001
Chromosome . Primary Identifier  III Chromosome Location . Start  3345918
Chromosome Location . End  3363001 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45H7.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45H7.2d F45H7.2d 4026   III: 3346506-3346517

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.2 3345918 3363001 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82817   178   III: 3345918-3346095 Caenorhabditis elegans
Exon82826   70   III: 3346448-3346517 Caenorhabditis elegans
Exon82830   177   III: 3346568-3346744 Caenorhabditis elegans
Exon82837   81   III: 3347016-3347096 Caenorhabditis elegans
Exon82842   158   III: 3347143-3347300 Caenorhabditis elegans
Exon82847   125   III: 3347425-3347549 Caenorhabditis elegans
Exon82852   200   III: 3347864-3348063 Caenorhabditis elegans
Exon82857   58   III: 3348111-3348168 Caenorhabditis elegans
Exon82862   72   III: 3350502-3350573 Caenorhabditis elegans
Exon82868   137   III: 3355012-3355148 Caenorhabditis elegans
Exon82873   45   III: 3355650-3355694 Caenorhabditis elegans
Exon82878   161   III: 3356247-3356407 Caenorhabditis elegans
Exon82883   81   III: 3356668-3356748 Caenorhabditis elegans
Exon82888   132   III: 3356893-3357024 Caenorhabditis elegans
Exon82893   125   III: 3357402-3357526 Caenorhabditis elegans
Exon82897   343   III: 3357924-3358266 Caenorhabditis elegans
Exon82901   185   III: 3358585-3358769 Caenorhabditis elegans
Exon82906   907   III: 3359169-3360075 Caenorhabditis elegans
Exon82911   112   III: 3360640-3360751 Caenorhabditis elegans
Exon82916   227   III: 3360798-3361024 Caenorhabditis elegans
Exon82921   387   III: 3361130-3361516 Caenorhabditis elegans
Exon82928   183   III: 3361589-3361771 Caenorhabditis elegans
Exon82932   118   III: 3362884-3363001 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45H7.2d.2 3345918 3363001 1

1 Sequence

Length
4262

1 Sequence Ontology Term

Identifier Name Description
transcript