WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C56G7.3a.1 Sequence Name  C56G7.3a.1
Length (nt)  1057   Chromosome Location  III: 3389919-3392525
Chromosome . Primary Identifier  III Chromosome Location . Start  3389919
Chromosome Location . End  3392525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008348 elmd-1 C56G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C56G7.3a C56G7.3a 969   III: 3389922-3389999

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C56G7.3a.1 3389919 3392525 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon82956   81   III: 3389919-3389999 Caenorhabditis elegans
Exon82957   597   III: 3390624-3391220 Caenorhabditis elegans
Exon82959   77   III: 3391681-3391757 Caenorhabditis elegans
Exon82961   128   III: 3392098-3392225 Caenorhabditis elegans
Exon82966   174   III: 3392352-3392525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C56G7.3a.1 3389919 3392525 1

1 Sequence

Length
1057

1 Sequence Ontology Term

Identifier Name Description
transcript