WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A2.6c.1 Sequence Name  F59A2.6c.1
Length (nt)  5499   Chromosome Location  III: 3405570-3425433
Chromosome . Primary Identifier  III Chromosome Location . Start  3405570
Chromosome Location . End  3425433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A2.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010306 golg-4 F59A2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A2.6c F59A2.6c 4803   III: 3405576-3405689

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59A2.6c.1 3405570 3425433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83018   120   III: 3405570-3405689 Caenorhabditis elegans
Exon83023   102   III: 3405734-3405835 Caenorhabditis elegans
Exon83027   252   III: 3406775-3407026 Caenorhabditis elegans
Exon83031   498   III: 3408018-3408515 Caenorhabditis elegans
Exon83035   345   III: 3409517-3409861 Caenorhabditis elegans
Exon83039   128   III: 3410962-3411089 Caenorhabditis elegans
Exon83046   91   III: 3416801-3416891 Caenorhabditis elegans
Exon83050   192   III: 3417330-3417521 Caenorhabditis elegans
Exon83054   1155   III: 3417856-3419010 Caenorhabditis elegans
Exon83058   225   III: 3419379-3419603 Caenorhabditis elegans
Exon83062   204   III: 3419729-3419932 Caenorhabditis elegans
Exon83066   225   III: 3420220-3420444 Caenorhabditis elegans
Exon83069   84   III: 3421125-3421208 Caenorhabditis elegans
Exon83072   170   III: 3421896-3422065 Caenorhabditis elegans
Exon83076   640   III: 3422851-3423490 Caenorhabditis elegans
Exon83080   240   III: 3424030-3424269 Caenorhabditis elegans
Exon83082   828   III: 3424606-3425433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59A2.6c.1 3405570 3425433 1

1 Sequence

Length
5499

1 Sequence Ontology Term

Identifier Name Description
transcript