WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59A2.6a.1 Sequence Name  F59A2.6a.1
Length (nt)  5660   Chromosome Location  III: 3405570-3425468
Chromosome . Primary Identifier  III Chromosome Location . Start  3405570
Chromosome Location . End  3425468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59A2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010306 golg-4 F59A2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59A2.6a F59A2.6a 4929   III: 3405576-3405689

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F59A2.6a.1 3405570 3425468 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83019   120   III: 3405570-3405689 Caenorhabditis elegans
Exon83021   102   III: 3405734-3405835 Caenorhabditis elegans
Exon83025   252   III: 3406775-3407026 Caenorhabditis elegans
Exon83029   498   III: 3408018-3408515 Caenorhabditis elegans
Exon83033   345   III: 3409517-3409861 Caenorhabditis elegans
Exon83037   128   III: 3410962-3411089 Caenorhabditis elegans
Exon83041   126   III: 3411471-3411596 Caenorhabditis elegans
Exon83044   91   III: 3416801-3416891 Caenorhabditis elegans
Exon83048   192   III: 3417330-3417521 Caenorhabditis elegans
Exon83052   1155   III: 3417856-3419010 Caenorhabditis elegans
Exon83056   225   III: 3419379-3419603 Caenorhabditis elegans
Exon83060   204   III: 3419729-3419932 Caenorhabditis elegans
Exon83064   225   III: 3420220-3420444 Caenorhabditis elegans
Exon83068   84   III: 3421125-3421208 Caenorhabditis elegans
Exon83070   170   III: 3421896-3422065 Caenorhabditis elegans
Exon83074   640   III: 3422851-3423490 Caenorhabditis elegans
Exon83078   240   III: 3424030-3424269 Caenorhabditis elegans
Exon83085   863   III: 3424606-3425468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F59A2.6a.1 3405570 3425468 1

1 Sequence

Length
5660

1 Sequence Ontology Term

Identifier Name Description
transcript