WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A11.1.1 Sequence Name  K01A11.1.1
Length (nt)  1083   Chromosome Location  III: 3428067-3431485
Chromosome . Primary Identifier  III Chromosome Location . Start  3428067
Chromosome Location . End  3431485 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010449 K01A11.1 K01A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A11.1 K01A11.1 597   III: 3428420-3428539

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.1.1 3428067 3431485 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83093   473   III: 3428067-3428539 Caenorhabditis elegans
Exon83094   133   III: 3429580-3429712 Caenorhabditis elegans
Exon83095   68   III: 3429917-3429984 Caenorhabditis elegans
Exon83096   174   III: 3430035-3430208 Caenorhabditis elegans
Exon83097   65   III: 3431105-3431169 Caenorhabditis elegans
Exon83098   170   III: 3431316-3431485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.1.1 3428067 3431485 -1

1 Sequence

Length
1083

1 Sequence Ontology Term

Identifier Name Description
transcript