WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A11.4a.1 Sequence Name  K01A11.4a.1
Length (nt)  2676   Chromosome Location  III: 3439011-3444207
Chromosome . Primary Identifier  III Chromosome Location . Start  3439011
Chromosome Location . End  3444207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004976 spe-41 K01A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A11.4a K01A11.4a 2565   III: 3439105-3439458

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.4a.1 3439011 3444207 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83101   448   III: 3439011-3439458 Caenorhabditis elegans
Exon83103   81   III: 3440139-3440219 Caenorhabditis elegans
Exon83105   87   III: 3440322-3440408 Caenorhabditis elegans
Exon83107   355   III: 3440455-3440809 Caenorhabditis elegans
Exon83109   170   III: 3440860-3441029 Caenorhabditis elegans
Exon83111   114   III: 3441484-3441597 Caenorhabditis elegans
Exon83113   233   III: 3441643-3441875 Caenorhabditis elegans
Exon83115   228   III: 3442041-3442268 Caenorhabditis elegans
Exon83118   130   III: 3442386-3442515 Caenorhabditis elegans
Exon83120   284   III: 3442569-3442852 Caenorhabditis elegans
Exon83122   132   III: 3442961-3443092 Caenorhabditis elegans
Exon83124   94   III: 3443145-3443238 Caenorhabditis elegans
Exon83126   162   III: 3443687-3443848 Caenorhabditis elegans
Exon83128   97   III: 3443897-3443993 Caenorhabditis elegans
Exon83129   61   III: 3444147-3444207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.4a.1 3439011 3444207 -1

1 Sequence

Length
2676

1 Sequence Ontology Term

Identifier Name Description
transcript