WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01A11.4b.1 Sequence Name  K01A11.4b.1
Length (nt)  2633   Chromosome Location  III: 3439105-3444210
Chromosome . Primary Identifier  III Chromosome Location . Start  3439105
Chromosome Location . End  3444210 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01A11.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004976 spe-41 K01A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01A11.4b K01A11.4b 2136   III: 3439105-3439458

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.4b.1 3439105 3444210 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83109   354   III: 3439105-3439458 Caenorhabditis elegans
Exon83111   81   III: 3440139-3440219 Caenorhabditis elegans
Exon83113   87   III: 3440322-3440408 Caenorhabditis elegans
Exon83115   355   III: 3440455-3440809 Caenorhabditis elegans
Exon83117   170   III: 3440860-3441029 Caenorhabditis elegans
Exon83119   114   III: 3441484-3441597 Caenorhabditis elegans
Exon83121   233   III: 3441643-3441875 Caenorhabditis elegans
Exon83123   228   III: 3442041-3442268 Caenorhabditis elegans
Exon83126   130   III: 3442386-3442515 Caenorhabditis elegans
Exon83128   284   III: 3442569-3442852 Caenorhabditis elegans
Exon83130   132   III: 3442961-3443092 Caenorhabditis elegans
Exon83132   94   III: 3443145-3443238 Caenorhabditis elegans
Exon83134   307   III: 3443687-3443993 Caenorhabditis elegans
Exon83137   64   III: 3444147-3444210 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01A11.4b.1 3439105 3444210 -1

1 Sequence

Length
2633

1 Sequence Ontology Term

Identifier Name Description
transcript