WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34C12.5.2 Sequence Name  C34C12.5.2
Length (nt)  888   Chromosome Location  III: 3472003-3473659
Chromosome . Primary Identifier  III Chromosome Location . Start  3472003
Chromosome Location . End  3473659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C12.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007924 rsu-1 C34C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34C12.5 C34C12.5 807   III: 3472009-3472096

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34C12.5.2 3472003 3473659 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83179   94   III: 3472003-3472096 Caenorhabditis elegans
Exon83182   89   III: 3472563-3472651 Caenorhabditis elegans
Exon83184   202   III: 3472708-3472909 Caenorhabditis elegans
Exon83186   269   III: 3473090-3473358 Caenorhabditis elegans
Exon83187   228   III: 3473410-3473637 Caenorhabditis elegans
Exon83189   6   III: 3473654-3473659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34C12.5.2 3472003 3473659 1

1 Sequence

Length
888

1 Sequence Ontology Term

Identifier Name Description
transcript