WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01F1.8a.1 Sequence Name  M01F1.8a.1
Length (nt)  1100   Chromosome Location  III: 3499373-3502545
Chromosome . Primary Identifier  III Chromosome Location . Start  3499373
Chromosome Location . End  3502545 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01F1.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010814 M01F1.8 M01F1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01F1.8a M01F1.8a 987   III: 3499477-3499610

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.8a.1 3499373 3502545 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83227   238   III: 3499373-3499610 Caenorhabditis elegans
Exon83228   301   III: 3500781-3501081 Caenorhabditis elegans
Exon83231   195   III: 3501873-3502067 Caenorhabditis elegans
Exon83232   195   III: 3502135-3502329 Caenorhabditis elegans
Exon83234   171   III: 3502375-3502545 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.8a.1 3499373 3502545 -1

1 Sequence

Length
1100

1 Sequence Ontology Term

Identifier Name Description
transcript