WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01F1.5.2 Sequence Name  M01F1.5.2
Length (nt)  2156   Chromosome Location  III: 3510924-3519607
Chromosome . Primary Identifier  III Chromosome Location . Start  3510924
Chromosome Location . End  3519607 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01F1.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010811 hmit-1.3 M01F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01F1.5 M01F1.5 1815   III: 3511057-3511418

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.5.2 3510924 3519607 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83279   495   III: 3510924-3511418 Caenorhabditis elegans
Exon83282   180   III: 3512216-3512395 Caenorhabditis elegans
Exon83284   151   III: 3512440-3512590 Caenorhabditis elegans
Exon83286   137   III: 3512644-3512780 Caenorhabditis elegans
Exon83288   80   III: 3513388-3513467 Caenorhabditis elegans
Exon83290   333   III: 3513528-3513860 Caenorhabditis elegans
Exon83292   460   III: 3514012-3514471 Caenorhabditis elegans
Exon83294   94   III: 3515680-3515773 Caenorhabditis elegans
Exon83296   163   III: 3516600-3516762 Caenorhabditis elegans
Exon83297   63   III: 3519545-3519607 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01F1.5.2 3510924 3519607 -1

1 Sequence

Length
2156

1 Sequence Ontology Term

Identifier Name Description
transcript