WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46F11.1a.1 Sequence Name  C46F11.1a.1
Length (nt)  2165   Chromosome Location  III: 3644375-3648822
Chromosome . Primary Identifier  III Chromosome Location . Start  3644375
Chromosome Location . End  3648822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006822 unc-93 C46F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46F11.1a C46F11.1a 2118   III: 3644375-3644482

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.1a.1 3644375 3648822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83475   108   III: 3644375-3644482 Caenorhabditis elegans
Exon83477   245   III: 3644535-3644779 Caenorhabditis elegans
Exon83479   87   III: 3644831-3644917 Caenorhabditis elegans
Exon83481   204   III: 3645119-3645322 Caenorhabditis elegans
Exon83483   97   III: 3645369-3645465 Caenorhabditis elegans
Exon83485   110   III: 3646070-3646179 Caenorhabditis elegans
Exon83487   135   III: 3646225-3646359 Caenorhabditis elegans
Exon83489   141   III: 3646612-3646752 Caenorhabditis elegans
Exon83491   126   III: 3646816-3646941 Caenorhabditis elegans
Exon83493   92   III: 3646988-3647079 Caenorhabditis elegans
Exon83495   88   III: 3647202-3647289 Caenorhabditis elegans
Exon83497   139   III: 3647337-3647475 Caenorhabditis elegans
Exon83499   174   III: 3647551-3647724 Caenorhabditis elegans
Exon83501   197   III: 3647770-3647966 Caenorhabditis elegans
Exon83503   97   III: 3648552-3648648 Caenorhabditis elegans
Exon83506   125   III: 3648698-3648822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.1a.1 3644375 3648822 1

1 Sequence

Length
2165

1 Sequence Ontology Term

Identifier Name Description
transcript