WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32A3.3a.2 Sequence Name  C32A3.3a.2
Length (nt)  1660   Chromosome Location  III: 3636149-3643679
Chromosome . Primary Identifier  III Chromosome Location . Start  3636149
Chromosome Location . End  3643679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32A3.3a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007860 rilp-1 C32A3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32A3.3a C32A3.3a 1260   III: 3636217-3636264

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32A3.3a.2 3636149 3643679 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83488   116   III: 3636149-3636264 Caenorhabditis elegans
Exon83492   99   III: 3638813-3638911 Caenorhabditis elegans
Exon83495   289   III: 3639978-3640266 Caenorhabditis elegans
Exon83498   116   III: 3641080-3641195 Caenorhabditis elegans
Exon83501   207   III: 3641250-3641456 Caenorhabditis elegans
Exon83504   173   III: 3642014-3642186 Caenorhabditis elegans
Exon83507   138   III: 3642972-3643109 Caenorhabditis elegans
Exon83511   522   III: 3643158-3643679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32A3.3a.2 3636149 3643679 1

1 Sequence

Length
1660

1 Sequence Ontology Term

Identifier Name Description
transcript