WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46F11.1b.1 Sequence Name  C46F11.1b.1
Length (nt)  2106   Chromosome Location  III: 3644387-3648775
Chromosome . Primary Identifier  III Chromosome Location . Start  3644387
Chromosome Location . End  3648775 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006822 unc-93 C46F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46F11.1b C46F11.1b 2103   III: 3644390-3644482

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.1b.1 3644387 3648775 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83513   96   III: 3644387-3644482 Caenorhabditis elegans
Exon83515   245   III: 3644535-3644779 Caenorhabditis elegans
Exon83517   87   III: 3644831-3644917 Caenorhabditis elegans
Exon83519   204   III: 3645119-3645322 Caenorhabditis elegans
Exon83521   97   III: 3645369-3645465 Caenorhabditis elegans
Exon83523   110   III: 3646070-3646179 Caenorhabditis elegans
Exon83525   135   III: 3646225-3646359 Caenorhabditis elegans
Exon83527   141   III: 3646612-3646752 Caenorhabditis elegans
Exon83529   126   III: 3646816-3646941 Caenorhabditis elegans
Exon83531   92   III: 3646988-3647079 Caenorhabditis elegans
Exon83533   88   III: 3647202-3647289 Caenorhabditis elegans
Exon83535   139   III: 3647337-3647475 Caenorhabditis elegans
Exon83537   174   III: 3647551-3647724 Caenorhabditis elegans
Exon83539   197   III: 3647770-3647966 Caenorhabditis elegans
Exon83541   97   III: 3648552-3648648 Caenorhabditis elegans
Exon83542   78   III: 3648698-3648775 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.1b.1 3644387 3648775 1

1 Sequence

Length
2106

1 Sequence Ontology Term

Identifier Name Description
transcript