WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46F11.5b.1 Sequence Name  C46F11.5b.1
Length (nt)  1789   Chromosome Location  III: 3652868-3657606
Chromosome . Primary Identifier  III Chromosome Location . Start  3652868
Chromosome Location . End  3657606 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F11.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008120 C46F11.5 C46F11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46F11.5b C46F11.5b 1470   III: 3653082-3653159

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.5b.1 3652868 3657606 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83530   292   III: 3652868-3653159 Caenorhabditis elegans
Exon83531   95   III: 3653207-3653301 Caenorhabditis elegans
Exon83534   129   III: 3653348-3653476 Caenorhabditis elegans
Exon83536   121   III: 3654008-3654128 Caenorhabditis elegans
Exon83538   160   III: 3654170-3654329 Caenorhabditis elegans
Exon83540   158   III: 3654401-3654558 Caenorhabditis elegans
Exon83543   197   III: 3654951-3655147 Caenorhabditis elegans
Exon83545   177   III: 3655800-3655976 Caenorhabditis elegans
Exon83547   88   III: 3656269-3656356 Caenorhabditis elegans
Exon83549   154   III: 3656413-3656566 Caenorhabditis elegans
Exon83551   218   III: 3657389-3657606 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.5b.1 3652868 3657606 -1

1 Sequence

Length
1789

1 Sequence Ontology Term

Identifier Name Description
transcript