WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46F11.4.1 Sequence Name  C46F11.4.1
Length (nt)  2542   Chromosome Location  III: 3657712-3664304
Chromosome . Primary Identifier  III Chromosome Location . Start  3657712
Chromosome Location . End  3664304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008119 C46F11.4 C46F11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46F11.4 C46F11.4 2436   III: 3657812-3658100

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.4.1 3657712 3664304 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83552   389   III: 3657712-3658100 Caenorhabditis elegans
Exon83553   436   III: 3659106-3659541 Caenorhabditis elegans
Exon83554   180   III: 3660457-3660636 Caenorhabditis elegans
Exon83555   240   III: 3660687-3660926 Caenorhabditis elegans
Exon83556   100   III: 3661832-3661931 Caenorhabditis elegans
Exon83557   132   III: 3661980-3662111 Caenorhabditis elegans
Exon83558   177   III: 3662164-3662340 Caenorhabditis elegans
Exon83559   172   III: 3662580-3662751 Caenorhabditis elegans
Exon83560   180   III: 3663358-3663537 Caenorhabditis elegans
Exon83561   252   III: 3663609-3663860 Caenorhabditis elegans
Exon83562   71   III: 3663913-3663983 Caenorhabditis elegans
Exon83563   128   III: 3664047-3664174 Caenorhabditis elegans
Exon83564   85   III: 3664220-3664304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46F11.4.1 3657712 3664304 -1

1 Sequence

Length
2542

1 Sequence Ontology Term

Identifier Name Description
transcript