WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27D1.3.1 Sequence Name  T27D1.3.1
Length (nt)  1196   Chromosome Location  III: 3683253-3685808
Chromosome . Primary Identifier  III Chromosome Location . Start  3683253
Chromosome Location . End  3685808 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012084 npr-15 T27D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27D1.3 T27D1.3 990   III: 3683443-3683548

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27D1.3.1 3683253 3685808 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83578   296   III: 3683253-3683548 Caenorhabditis elegans
Exon83579   126   III: 3683622-3683747 Caenorhabditis elegans
Exon83581   142   III: 3684167-3684308 Caenorhabditis elegans
Exon83583   159   III: 3684353-3684511 Caenorhabditis elegans
Exon83585   137   III: 3684717-3684853 Caenorhabditis elegans
Exon83587   96   III: 3685120-3685215 Caenorhabditis elegans
Exon83589   240   III: 3685569-3685808 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27D1.3.1 3683253 3685808 -1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript