WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F34D10.6b.1 Sequence Name  F34D10.6b.1
Length (nt)  2186   Chromosome Location  III: 3747524-3752412
Chromosome . Primary Identifier  III Chromosome Location . Start  3747524
Chromosome Location . End  3752412 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F34D10.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009375 arcp-1 F34D10.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F34D10.6b F34D10.6b 2112   III: 3747598-3747693

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F34D10.6b.1 3747524 3752412 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83709   170   III: 3747524-3747693 Caenorhabditis elegans
Exon83711   420   III: 3748281-3748700 Caenorhabditis elegans
Exon83713   201   III: 3748756-3748956 Caenorhabditis elegans
Exon83715   270   III: 3749296-3749565 Caenorhabditis elegans
Exon83717   102   III: 3749645-3749746 Caenorhabditis elegans
Exon83719   201   III: 3749792-3749992 Caenorhabditis elegans
Exon83721   381   III: 3750361-3750741 Caenorhabditis elegans
Exon83723   98   III: 3751150-3751247 Caenorhabditis elegans
Exon83725   261   III: 3751650-3751910 Caenorhabditis elegans
Exon83726   82   III: 3752331-3752412 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F34D10.6b.1 3747524 3752412 -1

1 Sequence

Length
2186

1 Sequence Ontology Term

Identifier Name Description
transcript