WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44F1.1.1 Sequence Name  C44F1.1.1
Length (nt)  2456   Chromosome Location  III: 3760378-3765560
Chromosome . Primary Identifier  III Chromosome Location . Start  3760378
Chromosome Location . End  3765560 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44F1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008091 C44F1.1 C44F1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44F1.1 C44F1.1 2232   III: 3760589-3760839

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44F1.1.1 3760378 3765560 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83739   462   III: 3760378-3760839 Caenorhabditis elegans
Exon83740   473   III: 3760969-3761441 Caenorhabditis elegans
Exon83741   527   III: 3761589-3762115 Caenorhabditis elegans
Exon83742   102   III: 3762339-3762440 Caenorhabditis elegans
Exon83743   105   III: 3762560-3762664 Caenorhabditis elegans
Exon83744   114   III: 3762716-3762829 Caenorhabditis elegans
Exon83745   223   III: 3762878-3763100 Caenorhabditis elegans
Exon83746   228   III: 3763860-3764087 Caenorhabditis elegans
Exon83747   143   III: 3764141-3764283 Caenorhabditis elegans
Exon83748   79   III: 3765482-3765560 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44F1.1.1 3760378 3765560 -1

1 Sequence

Length
2456

1 Sequence Ontology Term

Identifier Name Description
transcript