WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24A11.1a.1 Sequence Name  T24A11.1a.1
Length (nt)  3974   Chromosome Location  III: 3789982-3800467
Chromosome . Primary Identifier  III Chromosome Location . Start  3789982
Chromosome Location . End  3800467 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24A11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003476 mtm-3 T24A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24A11.1a T24A11.1a 3021   III: 3790825-3790838

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24A11.1a.1 3789982 3800467 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83781   857   III: 3789982-3790838 Caenorhabditis elegans
Exon83782   335   III: 3791280-3791614 Caenorhabditis elegans
Exon83783   758   III: 3792059-3792816 Caenorhabditis elegans
Exon83786   752   III: 3793475-3794226 Caenorhabditis elegans
Exon83789   329   III: 3795087-3795415 Caenorhabditis elegans
Exon83792   461   III: 3795945-3796405 Caenorhabditis elegans
Exon83795   177   III: 3796462-3796638 Caenorhabditis elegans
Exon83801   75   III: 3799801-3799875 Caenorhabditis elegans
Exon83802   137   III: 3799918-3800054 Caenorhabditis elegans
Exon83806   93   III: 3800375-3800467 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24A11.1a.1 3789982 3800467 -1

1 Sequence

Length
3974

1 Sequence Ontology Term

Identifier Name Description
transcript