WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24A11.2.1 Sequence Name  T24A11.2.1
Length (nt)  1781   Chromosome Location  III: 3801901-3804477
Chromosome . Primary Identifier  III Chromosome Location . Start  3801901
Chromosome Location . End  3804477 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011974 xbx-5 T24A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24A11.2 T24A11.2 996   III: 3802576-3802716

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24A11.2.1 3801901 3804477 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83807   816   III: 3801901-3802716 Caenorhabditis elegans
Exon83808   209   III: 3802762-3802970 Caenorhabditis elegans
Exon83809   278   III: 3803012-3803289 Caenorhabditis elegans
Exon83810   141   III: 3803331-3803471 Caenorhabditis elegans
Exon83811   337   III: 3804141-3804477 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24A11.2.1 3801901 3804477 -1

1 Sequence

Length
1781

1 Sequence Ontology Term

Identifier Name Description
transcript