WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13G10.2.1 Sequence Name  R13G10.2.1
Length (nt)  2641   Chromosome Location  III: 3822403-3826260
Chromosome . Primary Identifier  III Chromosome Location . Start  3822403
Chromosome Location . End  3826260 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13G10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000137 amx-1 R13G10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13G10.2 R13G10.2 2475   III: 3822430-3822454

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13G10.2.1 3822403 3826260 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83833   52   III: 3822403-3822454 Caenorhabditis elegans
Exon83834   71   III: 3822505-3822575 Caenorhabditis elegans
Exon83835   288   III: 3823004-3823291 Caenorhabditis elegans
Exon83836   411   III: 3823599-3824009 Caenorhabditis elegans
Exon83837   261   III: 3824196-3824456 Caenorhabditis elegans
Exon83838   388   III: 3824503-3824890 Caenorhabditis elegans
Exon83839   632   III: 3825002-3825633 Caenorhabditis elegans
Exon83840   538   III: 3825723-3826260 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13G10.2.1 3822403 3826260 1

1 Sequence

Length
2641

1 Sequence Ontology Term

Identifier Name Description
transcript