WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13G10.4.1 Sequence Name  R13G10.4.1
Length (nt)  2292   Chromosome Location  III: 3826255-3829205
Chromosome . Primary Identifier  III Chromosome Location . Start  3826255
Chromosome Location . End  3829205 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13G10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011260 cnnm-5 R13G10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13G10.4 R13G10.4 2169   III: 3826378-3826496

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13G10.4.1 3826255 3829205 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83841   242   III: 3826255-3826496 Caenorhabditis elegans
Exon83842   88   III: 3826645-3826732 Caenorhabditis elegans
Exon83843   202   III: 3826776-3826977 Caenorhabditis elegans
Exon83844   408   III: 3827024-3827431 Caenorhabditis elegans
Exon83845   299   III: 3827547-3827845 Caenorhabditis elegans
Exon83846   107   III: 3827894-3828000 Caenorhabditis elegans
Exon83847   205   III: 3828051-3828255 Caenorhabditis elegans
Exon83848   198   III: 3828303-3828500 Caenorhabditis elegans
Exon83849   336   III: 3828546-3828881 Caenorhabditis elegans
Exon83850   207   III: 3828999-3829205 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13G10.4.1 3826255 3829205 -1

1 Sequence

Length
2292

1 Sequence Ontology Term

Identifier Name Description
transcript