WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36A4.2.1 Sequence Name  C36A4.2.1
Length (nt)  1570   Chromosome Location  III: 3835221-3837211
Chromosome . Primary Identifier  III Chromosome Location . Start  3835221
Chromosome Location . End  3837211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36A4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007964 cyp-25A2 C36A4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36A4.2 C36A4.2 1509   III: 3835221-3835378

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36A4.2.1 3835221 3837211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon83909   158   III: 3835221-3835378 Caenorhabditis elegans
Exon83910   78   III: 3835428-3835505 Caenorhabditis elegans
Exon83911   122   III: 3835550-3835671 Caenorhabditis elegans
Exon83912   187   III: 3835726-3835912 Caenorhabditis elegans
Exon83913   155   III: 3835967-3836121 Caenorhabditis elegans
Exon83914   97   III: 3836167-3836263 Caenorhabditis elegans
Exon83915   333   III: 3836386-3836718 Caenorhabditis elegans
Exon83916   440   III: 3836772-3837211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36A4.2.1 3835221 3837211 1

1 Sequence

Length
1570

1 Sequence Ontology Term

Identifier Name Description
transcript