WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1058.1.1 Sequence Name  ZK1058.1.1
Length (nt)  2476   Chromosome Location  III: 3903185-3907687
Chromosome . Primary Identifier  III Chromosome Location . Start  3903185
Chromosome Location . End  3907687 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1058.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014202 mmcm-1 ZK1058.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1058.1 ZK1058.1 2235   III: 3903398-3903575

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1058.1.1 3903185 3907687 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84128   391   III: 3903185-3903575 Caenorhabditis elegans
Exon84129   287   III: 3903625-3903911 Caenorhabditis elegans
Exon84130   453   III: 3904601-3905053 Caenorhabditis elegans
Exon84131   258   III: 3905586-3905843 Caenorhabditis elegans
Exon84132   649   III: 3905888-3906536 Caenorhabditis elegans
Exon84133   438   III: 3907250-3907687 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1058.1.1 3903185 3907687 -1

1 Sequence

Length
2476

1 Sequence Ontology Term

Identifier Name Description
transcript