WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1058.6.1 Sequence Name  ZK1058.6.1
Length (nt)  1114   Chromosome Location  III: 3922207-3923873
Chromosome . Primary Identifier  III Chromosome Location . Start  3922207
Chromosome Location . End  3923873 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1058.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014206 nit-1 ZK1058.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1058.6 ZK1058.6 918   III: 3922452-3922663

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1058.6.1 3922207 3923873 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84150   20   III: 3922207-3922226 Caenorhabditis elegans
Exon84152   83   III: 3922261-3922343 Caenorhabditis elegans
Exon84154   219   III: 3922445-3922663 Caenorhabditis elegans
Exon84156   320   III: 3922812-3923131 Caenorhabditis elegans
Exon84159   82   III: 3923181-3923262 Caenorhabditis elegans
Exon84162   390   III: 3923484-3923873 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1058.6.1 3922207 3923873 1

1 Sequence

Length
1114

1 Sequence Ontology Term

Identifier Name Description
transcript