WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK1058.6 Sequence Name  ZK1058.6
Length (nt)  918   Chromosome Location  III: 3922452-3922663
Chromosome . Primary Identifier  III Chromosome Location . Start  3922452
Chromosome Location . End  3922663
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1058.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01106 NIT-1 34.1 305 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00059087
WBRNAi00021793
WBRNAi00006947

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK1058.6 3922452 3922663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014206 nit-1 ZK1058.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK1058.6 3922452 3922663 1
CDS:ZK1058.6 3922812 3923131 1
CDS:ZK1058.6 3923181 3923262 1
CDS:ZK1058.6 3923484 3923787 1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1058.6.1 ZK1058.6.1 1114   III: 3922207-3923873
Transcript:ZK1058.6.2 ZK1058.6.2 1120   III: 3922235-3923873
Transcript:ZK1058.6.3 ZK1058.6.3 1018   III: 3922438-3923873