WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C36E8.1.1 Sequence Name  C36E8.1.1
Length (nt)  2503   Chromosome Location  III: 3999286-4004114
Chromosome . Primary Identifier  III Chromosome Location . Start  3999286
Chromosome Location . End  4004114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C36E8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007980 tif-1A C36E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C36E8.1 C36E8.1 1965   III: 3999659-3999744

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C36E8.1.1 3999286 4004114 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84241   459   III: 3999286-3999744 Caenorhabditis elegans
Exon84242   194   III: 4000179-4000372 Caenorhabditis elegans
Exon84243   99   III: 4000712-4000810 Caenorhabditis elegans
Exon84244   112   III: 4000930-4001041 Caenorhabditis elegans
Exon84245   179   III: 4001098-4001276 Caenorhabditis elegans
Exon84246   566   III: 4002183-4002748 Caenorhabditis elegans
Exon84247   420   III: 4003049-4003468 Caenorhabditis elegans
Exon84248   263   III: 4003531-4003793 Caenorhabditis elegans
Exon84249   111   III: 4003849-4003959 Caenorhabditis elegans
Exon84250   100   III: 4004015-4004114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C36E8.1.1 3999286 4004114 -1

1 Sequence

Length
2503

1 Sequence Ontology Term

Identifier Name Description
transcript