WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y1A5A.1 Sequence Name  Y1A5A.1
Length (nt)  408   Chromosome Location  III: 3985674-3985937
Chromosome . Primary Identifier  III Chromosome Location . Start  3985674
Chromosome Location . End  3985937
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y1A5A.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54362 Y1A5A.1 15.8 135 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00055644
WBRNAi00055645
WBRNAi00109200
WBRNAi00116136
WBRNAi00020115
WBRNAi00006297
WBRNAi00007115
WBRNAi00007150
WBRNAi00109589
WBRNAi00109298
WBRNAi00109492
WBRNAi00109395

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y1A5A.1 3985674 3985937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012379 Y1A5A.1 Y1A5A.1 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y1A5A.1 3985674 3985937 -1
CDS:Y1A5A.1 3986495 3986638 -1

1 Sequence

Length
408

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y1A5A.1.1 Y1A5A.1.1 540   III: 3985565-3986661