WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C12.1.2 Sequence Name  T02C12.1.2
Length (nt)  3332   Chromosome Location  III: 4029095-4036840
Chromosome . Primary Identifier  III Chromosome Location . Start  4029095
Chromosome Location . End  4036840 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C12.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002038 hum-5 T02C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C12.1 T02C12.1 3054   III: 4029366-4029543

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02C12.1.2 4029095 4036840 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84331   449   III: 4029095-4029543 Caenorhabditis elegans
Exon84334   146   III: 4029639-4029784 Caenorhabditis elegans
Exon84336   225   III: 4030235-4030459 Caenorhabditis elegans
Exon84338   247   III: 4030507-4030753 Caenorhabditis elegans
Exon84340   122   III: 4031092-4031213 Caenorhabditis elegans
Exon84342   297   III: 4031342-4031638 Caenorhabditis elegans
Exon84344   214   III: 4031901-4032114 Caenorhabditis elegans
Exon84346   293   III: 4032159-4032451 Caenorhabditis elegans
Exon84348   136   III: 4032496-4032631 Caenorhabditis elegans
Exon84350   140   III: 4032674-4032813 Caenorhabditis elegans
Exon84352   246   III: 4033003-4033248 Caenorhabditis elegans
Exon84354   90   III: 4033297-4033386 Caenorhabditis elegans
Exon84356   150   III: 4033771-4033920 Caenorhabditis elegans
Exon84358   363   III: 4033995-4034357 Caenorhabditis elegans
Exon84360   106   III: 4034648-4034753 Caenorhabditis elegans
Exon84363   108   III: 4036733-4036840 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02C12.1.2 4029095 4036840 -1

1 Sequence

Length
3332

1 Sequence Ontology Term

Identifier Name Description
transcript