WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03A3.6b.1 Sequence Name  E03A3.6b.1
Length (nt)  6413   Chromosome Location  III: 4066633-4082797
Chromosome . Primary Identifier  III Chromosome Location . Start  4066633
Chromosome Location . End  4082797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03A3.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006811 unc-79 E03A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03A3.6b E03A3.6b 2613   III: 4078698-4078921

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6b.1 4066633 4082797 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84363   109   III: 4066633-4066741 Caenorhabditis elegans
Exon84366   118   III: 4069266-4069383 Caenorhabditis elegans
Exon84368   161   III: 4070909-4071069 Caenorhabditis elegans
Exon84370   128   III: 4071125-4071252 Caenorhabditis elegans
Exon84372   115   III: 4071300-4071414 Caenorhabditis elegans
Exon84374   173   III: 4071457-4071629 Caenorhabditis elegans
Exon84377   537   III: 4071897-4072433 Caenorhabditis elegans
Exon84379   579   III: 4072563-4073141 Caenorhabditis elegans
Exon84381   316   III: 4073289-4073604 Caenorhabditis elegans
Exon84383   83   III: 4073658-4073740 Caenorhabditis elegans
Exon84385   963   III: 4073912-4074874 Caenorhabditis elegans
Exon84387   199   III: 4074923-4075121 Caenorhabditis elegans
Exon84389   159   III: 4075966-4076124 Caenorhabditis elegans
Exon84394   268   III: 4078654-4078921 Caenorhabditis elegans
Exon84397   68   III: 4078969-4079036 Caenorhabditis elegans
Exon84401   231   III: 4079082-4079312 Caenorhabditis elegans
Exon84405   304   III: 4079359-4079662 Caenorhabditis elegans
Exon84409   153   III: 4079840-4079992 Caenorhabditis elegans
Exon84413   391   III: 4080044-4080434 Caenorhabditis elegans
Exon84417   222   III: 4080515-4080736 Caenorhabditis elegans
Exon84421   310   III: 4081072-4081381 Caenorhabditis elegans
Exon84425   260   III: 4081437-4081696 Caenorhabditis elegans
Exon84429   174   III: 4081742-4081915 Caenorhabditis elegans
Exon84433   140   III: 4082354-4082493 Caenorhabditis elegans
Exon84438   252   III: 4082546-4082797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6b.1 4066633 4082797 1

1 Sequence

Length
6413

1 Sequence Ontology Term

Identifier Name Description
transcript