WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03A3.2.1 Sequence Name  E03A3.2.1
Length (nt)  3147   Chromosome Location  III: 4052254-4057976
Chromosome . Primary Identifier  III Chromosome Location . Start  4052254
Chromosome Location . End  4057976 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03A3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004322 rcq-5 E03A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03A3.2 E03A3.2 2466   III: 4052935-4053036

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.2.1 4052254 4057976 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84375   783   III: 4052254-4053036 Caenorhabditis elegans
Exon84376   168   III: 4053087-4053254 Caenorhabditis elegans
Exon84377   324   III: 4053959-4054282 Caenorhabditis elegans
Exon84378   118   III: 4054327-4054444 Caenorhabditis elegans
Exon84379   98   III: 4054793-4054890 Caenorhabditis elegans
Exon84380   169   III: 4054943-4055111 Caenorhabditis elegans
Exon84381   323   III: 4055462-4055784 Caenorhabditis elegans
Exon84382   208   III: 4056087-4056294 Caenorhabditis elegans
Exon84383   526   III: 4056724-4057249 Caenorhabditis elegans
Exon84384   283   III: 4057502-4057784 Caenorhabditis elegans
Exon84385   147   III: 4057830-4057976 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.2.1 4052254 4057976 -1

1 Sequence

Length
3147

1 Sequence Ontology Term

Identifier Name Description
transcript