WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03A3.6a.1 Sequence Name  E03A3.6a.1
Length (nt)  6531   Chromosome Location  III: 4066633-4082849
Chromosome . Primary Identifier  III Chromosome Location . Start  4066633
Chromosome Location . End  4082849 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03A3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006811 unc-79 E03A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03A3.6a E03A3.6a 6279   III: 4066717-4066741

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6a.1 4066633 4082849 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84394   109   III: 4066633-4066741 Caenorhabditis elegans
Exon84395   118   III: 4069266-4069383 Caenorhabditis elegans
Exon84397   161   III: 4070909-4071069 Caenorhabditis elegans
Exon84399   128   III: 4071125-4071252 Caenorhabditis elegans
Exon84401   115   III: 4071300-4071414 Caenorhabditis elegans
Exon84403   173   III: 4071457-4071629 Caenorhabditis elegans
Exon84406   537   III: 4071897-4072433 Caenorhabditis elegans
Exon84408   579   III: 4072563-4073141 Caenorhabditis elegans
Exon84410   316   III: 4073289-4073604 Caenorhabditis elegans
Exon84412   83   III: 4073658-4073740 Caenorhabditis elegans
Exon84414   963   III: 4073912-4074874 Caenorhabditis elegans
Exon84416   199   III: 4074923-4075121 Caenorhabditis elegans
Exon84418   159   III: 4075966-4076124 Caenorhabditis elegans
Exon84421   66   III: 4077670-4077735 Caenorhabditis elegans
Exon84423   268   III: 4078654-4078921 Caenorhabditis elegans
Exon84426   68   III: 4078969-4079036 Caenorhabditis elegans
Exon84430   231   III: 4079082-4079312 Caenorhabditis elegans
Exon84434   304   III: 4079359-4079662 Caenorhabditis elegans
Exon84438   153   III: 4079840-4079992 Caenorhabditis elegans
Exon84442   391   III: 4080044-4080434 Caenorhabditis elegans
Exon84446   222   III: 4080515-4080736 Caenorhabditis elegans
Exon84450   310   III: 4081072-4081381 Caenorhabditis elegans
Exon84454   260   III: 4081437-4081696 Caenorhabditis elegans
Exon84458   174   III: 4081742-4081915 Caenorhabditis elegans
Exon84462   140   III: 4082354-4082493 Caenorhabditis elegans
Exon84469   304   III: 4082546-4082849 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6a.1 4066633 4082849 1

1 Sequence

Length
6531

1 Sequence Ontology Term

Identifier Name Description
transcript