WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E03A3.6b.2 Sequence Name  E03A3.6b.2
Length (nt)  2800   Chromosome Location  III: 4077664-4082752
Chromosome . Primary Identifier  III Chromosome Location . Start  4077664
Chromosome Location . End  4082752 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03A3.6b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006811 unc-79 E03A3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E03A3.6b E03A3.6b 2613   III: 4078698-4078921

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6b.2 4077664 4082752 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84420   72   III: 4077664-4077735 Caenorhabditis elegans
Exon84425   268   III: 4078654-4078921 Caenorhabditis elegans
Exon84428   68   III: 4078969-4079036 Caenorhabditis elegans
Exon84432   231   III: 4079082-4079312 Caenorhabditis elegans
Exon84436   304   III: 4079359-4079662 Caenorhabditis elegans
Exon84440   153   III: 4079840-4079992 Caenorhabditis elegans
Exon84444   391   III: 4080044-4080434 Caenorhabditis elegans
Exon84448   222   III: 4080515-4080736 Caenorhabditis elegans
Exon84452   310   III: 4081072-4081381 Caenorhabditis elegans
Exon84456   260   III: 4081437-4081696 Caenorhabditis elegans
Exon84460   174   III: 4081742-4081915 Caenorhabditis elegans
Exon84464   140   III: 4082354-4082493 Caenorhabditis elegans
Exon84466   207   III: 4082546-4082752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E03A3.6b.2 4077664 4082752 1

1 Sequence

Length
2800

1 Sequence Ontology Term

Identifier Name Description
transcript