WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30D11.1e.1 Sequence Name  C30D11.1e.1
Length (nt)  2406   Chromosome Location  III: 4134230-4146447
Chromosome . Primary Identifier  III Chromosome Location . Start  4134230
Chromosome Location . End  4146447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30D11.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30D11.1e C30D11.1e 2406   III: 4134230-4134406

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1e.1 4134230 4146447 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84535   177   III: 4134230-4134406 Caenorhabditis elegans
Exon84548   83   III: 4139286-4139368 Caenorhabditis elegans
Exon84567   223   III: 4139790-4140012 Caenorhabditis elegans
Exon84586   123   III: 4140700-4140822 Caenorhabditis elegans
Exon84605   155   III: 4140873-4141027 Caenorhabditis elegans
Exon84624   59   III: 4141197-4141255 Caenorhabditis elegans
Exon84643   308   III: 4141566-4141873 Caenorhabditis elegans
Exon84662   206   III: 4141989-4142194 Caenorhabditis elegans
Exon84681   131   III: 4142245-4142375 Caenorhabditis elegans
Exon84701   106   III: 4142569-4142674 Caenorhabditis elegans
Exon84720   278   III: 4142908-4143185 Caenorhabditis elegans
Exon84739   231   III: 4143942-4144172 Caenorhabditis elegans
Exon84751   67   III: 4144579-4144645 Caenorhabditis elegans
Exon84770   104   III: 4144864-4144967 Caenorhabditis elegans
Exon84789   155   III: 4146293-4146447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1e.1 4134230 4146447 1

1 Sequence

Length
2406

1 Sequence Ontology Term

Identifier Name Description
transcript