WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30D11.1r.1 Sequence Name  C30D11.1r.1
Length (nt)  2367   Chromosome Location  III: 4138712-4146447
Chromosome . Primary Identifier  III Chromosome Location . Start  4138712
Chromosome Location . End  4146447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30D11.1r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30D11.1r C30D11.1r 2367   III: 4138712-4138858

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1r.1 4138712 4146447 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84504   147   III: 4138712-4138858 Caenorhabditis elegans
Exon84524   83   III: 4139286-4139368 Caenorhabditis elegans
Exon84543   223   III: 4139790-4140012 Caenorhabditis elegans
Exon84562   114   III: 4140709-4140822 Caenorhabditis elegans
Exon84581   155   III: 4140873-4141027 Caenorhabditis elegans
Exon84600   59   III: 4141197-4141255 Caenorhabditis elegans
Exon84619   308   III: 4141566-4141873 Caenorhabditis elegans
Exon84638   206   III: 4141989-4142194 Caenorhabditis elegans
Exon84657   131   III: 4142245-4142375 Caenorhabditis elegans
Exon84677   106   III: 4142569-4142674 Caenorhabditis elegans
Exon84696   278   III: 4142908-4143185 Caenorhabditis elegans
Exon84709   231   III: 4143942-4144172 Caenorhabditis elegans
Exon84727   67   III: 4144579-4144645 Caenorhabditis elegans
Exon84745   104   III: 4144864-4144967 Caenorhabditis elegans
Exon84761   155   III: 4146293-4146447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1r.1 4138712 4146447 1

1 Sequence

Length
2367

1 Sequence Ontology Term

Identifier Name Description
transcript