WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30D11.1p.1 Sequence Name  C30D11.1p.1
Length (nt)  2397   Chromosome Location  III: 4134230-4146447
Chromosome . Primary Identifier  III Chromosome Location . Start  4134230
Chromosome Location . End  4146447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30D11.1p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30D11.1p C30D11.1p 2397   III: 4134230-4134406

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1p.1 4134230 4146447 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84536   177   III: 4134230-4134406 Caenorhabditis elegans
Exon84559   83   III: 4139286-4139368 Caenorhabditis elegans
Exon84578   223   III: 4139790-4140012 Caenorhabditis elegans
Exon84597   114   III: 4140709-4140822 Caenorhabditis elegans
Exon84616   155   III: 4140873-4141027 Caenorhabditis elegans
Exon84635   59   III: 4141197-4141255 Caenorhabditis elegans
Exon84654   308   III: 4141566-4141873 Caenorhabditis elegans
Exon84673   206   III: 4141989-4142194 Caenorhabditis elegans
Exon84692   131   III: 4142245-4142375 Caenorhabditis elegans
Exon84712   106   III: 4142569-4142674 Caenorhabditis elegans
Exon84731   278   III: 4142908-4143185 Caenorhabditis elegans
Exon84745   231   III: 4143942-4144172 Caenorhabditis elegans
Exon84762   67   III: 4144579-4144645 Caenorhabditis elegans
Exon84780   104   III: 4144864-4144967 Caenorhabditis elegans
Exon84796   155   III: 4146293-4146447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1p.1 4134230 4146447 1

1 Sequence

Length
2397

1 Sequence Ontology Term

Identifier Name Description
transcript