WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30D11.1s.1 Sequence Name  C30D11.1s.1
Length (nt)  2136   Chromosome Location  III: 4138712-4146447
Chromosome . Primary Identifier  III Chromosome Location . Start  4138712
Chromosome Location . End  4146447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30D11.1s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30D11.1s C30D11.1s 2136   III: 4138712-4138858

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1s.1 4138712 4146447 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84505   147   III: 4138712-4138858 Caenorhabditis elegans
Exon84525   83   III: 4139286-4139368 Caenorhabditis elegans
Exon84544   223   III: 4139790-4140012 Caenorhabditis elegans
Exon84563   114   III: 4140709-4140822 Caenorhabditis elegans
Exon84582   155   III: 4140873-4141027 Caenorhabditis elegans
Exon84601   59   III: 4141197-4141255 Caenorhabditis elegans
Exon84620   308   III: 4141566-4141873 Caenorhabditis elegans
Exon84639   206   III: 4141989-4142194 Caenorhabditis elegans
Exon84658   131   III: 4142245-4142375 Caenorhabditis elegans
Exon84678   106   III: 4142569-4142674 Caenorhabditis elegans
Exon84697   278   III: 4142908-4143185 Caenorhabditis elegans
Exon84728   67   III: 4144579-4144645 Caenorhabditis elegans
Exon84746   104   III: 4144864-4144967 Caenorhabditis elegans
Exon84762   155   III: 4146293-4146447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30D11.1s.1 4138712 4146447 1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript