WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C10.12b.1 Sequence Name  C16C10.12b.1
Length (nt)  1803   Chromosome Location  III: 4147454-4151551
Chromosome . Primary Identifier  III Chromosome Location . Start  4147454
Chromosome Location . End  4151551 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007631 wht-3 C16C10.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C10.12b C16C10.12b 1803   III: 4147454-4147594

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.12b.1 4147454 4151551 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84770   141   III: 4147454-4147594 Caenorhabditis elegans
Exon84772   67   III: 4147640-4147706 Caenorhabditis elegans
Exon84776   119   III: 4147780-4147898 Caenorhabditis elegans
Exon84780   184   III: 4147945-4148128 Caenorhabditis elegans
Exon84784   273   III: 4148540-4148812 Caenorhabditis elegans
Exon84788   251   III: 4149406-4149656 Caenorhabditis elegans
Exon84792   384   III: 4149911-4150294 Caenorhabditis elegans
Exon84795   145   III: 4150625-4150769 Caenorhabditis elegans
Exon84802   105   III: 4150870-4150974 Caenorhabditis elegans
Exon84804   47   III: 4151239-4151285 Caenorhabditis elegans
Exon84805   87   III: 4151465-4151551 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.12b.1 4147454 4151551 -1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript