WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C10.8.1 Sequence Name  C16C10.8.1
Length (nt)  835   Chromosome Location  III: 4161970-4164171
Chromosome . Primary Identifier  III Chromosome Location . Start  4161970
Chromosome Location . End  4164171 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007628 C16C10.8 C16C10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C10.8 C16C10.8 762   III: 4162043-4162330

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.8.1 4161970 4164171 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84826   361   III: 4161970-4162330 Caenorhabditis elegans
Exon84827   355   III: 4162855-4163209 Caenorhabditis elegans
Exon84828   68   III: 4163532-4163599 Caenorhabditis elegans
Exon84829   51   III: 4164121-4164171 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.8.1 4161970 4164171 -1

1 Sequence

Length
835

1 Sequence Ontology Term

Identifier Name Description
transcript