WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C16C10.7a Sequence Name  C16C10.7a
Length (nt)  708   Chromosome Location  III: 4164543-4164664
Chromosome . Primary Identifier  III Chromosome Location . Start  4164543
Chromosome Location . End  4164664
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.7a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01498 RNF-5, isoform a 24.9 235 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00094736
WBRNAi00040684
WBRNAi00064163
WBRNAi00010831
WBRNAi00076135
WBRNAi00091314
WBRNAi00005976
WBRNAi00028956
WBRNAi00065285
WBRNAi00063621
WBRNAi00064164

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C16C10.7a 4164543 4164664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004381 rnf-5 C16C10.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:C16C10.7a 4164543 4164664 -1
CDS:C16C10.7a 4165090 4165360 -1
CDS:C16C10.7a 4165918 4166164 -1
CDS:C16C10.7a 4166766 4166833 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C16C10.7a.1 C16C10.7a.1 988   III: 4164275-4166845