WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C10.1.1 Sequence Name  C16C10.1.1
Length (nt)  1365   Chromosome Location  III: 4178786-4181438
Chromosome . Primary Identifier  III Chromosome Location . Start  4178786
Chromosome Location . End  4181438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007622 C16C10.1 C16C10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C10.1 C16C10.1 1083   III: 4179062-4179156

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.1.1 4178786 4181438 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84875   371   III: 4178786-4179156 Caenorhabditis elegans
Exon84876   357   III: 4179209-4179565 Caenorhabditis elegans
Exon84877   161   III: 4180174-4180334 Caenorhabditis elegans
Exon84878   310   III: 4180387-4180696 Caenorhabditis elegans
Exon84879   96   III: 4180955-4181050 Caenorhabditis elegans
Exon84880   70   III: 4181369-4181438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.1.1 4178786 4181438 -1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
transcript