WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R74.1.1 Sequence Name  R74.1.1
Length (nt)  3741   Chromosome Location  III: 4181549-4186801
Chromosome . Primary Identifier  III Chromosome Location . Start  4181549
Chromosome Location . End  4186801 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003073 lars-1 R74.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R74.1 R74.1 3561   III: 4181712-4181926

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R74.1.1 4181549 4186801 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84881   378   III: 4181549-4181926 Caenorhabditis elegans
Exon84882   133   III: 4181980-4182112 Caenorhabditis elegans
Exon84883   630   III: 4182370-4182999 Caenorhabditis elegans
Exon84884   912   III: 4183269-4184180 Caenorhabditis elegans
Exon84885   1086   III: 4184606-4185691 Caenorhabditis elegans
Exon84886   472   III: 4186150-4186621 Caenorhabditis elegans
Exon84887   130   III: 4186672-4186801 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R74.1.1 4181549 4186801 -1

1 Sequence

Length
3741

1 Sequence Ontology Term

Identifier Name Description
transcript