WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C10.2.1 Sequence Name  C16C10.2.1
Length (nt)  916   Chromosome Location  III: 4177545-4178664
Chromosome . Primary Identifier  III Chromosome Location . Start  4177545
Chromosome Location . End  4178664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007623 utp-11 C16C10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C10.2 C16C10.2 789   III: 4177666-4177872

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.2.1 4177545 4178664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84908   328   III: 4177545-4177872 Caenorhabditis elegans
Exon84909   131   III: 4177977-4178107 Caenorhabditis elegans
Exon84910   220   III: 4178158-4178377 Caenorhabditis elegans
Exon84911   237   III: 4178428-4178664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C10.2.1 4177545 4178664 -1

1 Sequence

Length
916

1 Sequence Ontology Term

Identifier Name Description
transcript