WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R74.3.1 Sequence Name  R74.3.1
Length (nt)  1446   Chromosome Location  III: 4193809-4195358
Chromosome . Primary Identifier  III Chromosome Location . Start  4193809
Chromosome Location . End  4195358 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006959 xbp-1 R74.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R74.3 R74.3 864   III: 4193983-4194231

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R74.3.1 4193809 4195358 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84905   423   III: 4193809-4194231 Caenorhabditis elegans
Exon84907   479   III: 4194282-4194760 Caenorhabditis elegans
Exon84910   544   III: 4194815-4195358 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R74.3.1 4193809 4195358 1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
transcript