WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R74.3.2 Sequence Name  R74.3.2
Length (nt)  1357   Chromosome Location  III: 4193821-4195321
Chromosome . Primary Identifier  III Chromosome Location . Start  4193821
Chromosome Location . End  4195321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006959 xbp-1 R74.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R74.3 R74.3 864   III: 4193983-4194231

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R74.3.2 4193821 4195321 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84906   411   III: 4193821-4194231 Caenorhabditis elegans
Exon84908   479   III: 4194282-4194760 Caenorhabditis elegans
Exon84909   201   III: 4194815-4195015 Caenorhabditis elegans
Exon84911   266   III: 4195056-4195321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R74.3.2 4193821 4195321 1

1 Sequence

Length
1357

1 Sequence Ontology Term

Identifier Name Description
transcript