WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R74.5a Sequence Name  R74.5a
Length (nt)  1215   Chromosome Location  III: 4197298-4197327
Chromosome . Primary Identifier  III Chromosome Location . Start  4197298
Chromosome Location . End  4197327
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01058 ASD-1, isoform a 43.8 404 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00052051
WBRNAi00017919
WBRNAi00005038
WBRNAi00034978
WBRNAi00073246
WBRNAi00094963
WBRNAi00092388

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R74.5a 4197298 4197327 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011279 asd-1 R74.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:R74.5a 4197298 4197327 1
CDS:R74.5a 4198869 4199115 1
CDS:R74.5a 4199985 4200124 1
CDS:R74.5a 4200174 4200321 1
CDS:R74.5a 4200613 4201050 1
CDS:R74.5a 4201614 4201825 1

1 Sequence

Length
1215

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R74.5a.1 R74.5a.1 1663   III: 4197285-4202260