WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R74.4b.1 Sequence Name  R74.4b.1
Length (nt)  1557   Chromosome Location  III: 4191141-4193427
Chromosome . Primary Identifier  III Chromosome Location . Start  4191141
Chromosome Location . End  4193427 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R74.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001034 dnj-16 R74.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R74.4b R74.4b 1188   III: 4191241-4191277

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R74.4b.1 4191141 4193427 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon84931   137   III: 4191141-4191277 Caenorhabditis elegans
Exon84932   95   III: 4191548-4191642 Caenorhabditis elegans
Exon84935   223   III: 4191797-4192019 Caenorhabditis elegans
Exon84937   167   III: 4192135-4192301 Caenorhabditis elegans
Exon84939   525   III: 4192431-4192955 Caenorhabditis elegans
Exon84940   410   III: 4193018-4193427 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R74.4b.1 4191141 4193427 1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript