WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43C1.2b Sequence Name  F43C1.2b
Length (nt)  1335   Chromosome Location  III: 4217396-4217615
Chromosome . Primary Identifier  III Chromosome Location . Start  4217396
Chromosome Location . End  4217615
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C1.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24971 MPK-1, isoform b 50.6 444 Caenorhabditis elegans
 

Other

115 RNAi

WormBase ID
WBRNAi00101975
WBRNAi00101976
WBRNAi00110543
WBRNAi00113183
WBRNAi00067095
WBRNAi00067367
WBRNAi00067538
WBRNAi00067597
WBRNAi00067959
WBRNAi00068041
WBRNAi00068090
WBRNAi00068205
WBRNAi00047161
WBRNAi00072495
WBRNAi00072496
WBRNAi00027587
WBRNAi00101981
WBRNAi00085349
WBRNAi00072494
WBRNAi00068479
WBRNAi00068478
WBRNAi00068751
WBRNAi00073555
WBRNAi00073557
WBRNAi00073560
WBRNAi00087339
WBRNAi00087338
WBRNAi00108296
WBRNAi00068811
WBRNAi00068923

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43C1.2b 4217396 4217615 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003401 mpk-1 F43C1.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43C1.2b 4217396 4217615 -1
CDS:F43C1.2b 4218081 4218680 -1
CDS:F43C1.2b 4219078 4219133 -1
CDS:F43C1.2b 4219188 4219314 -1
CDS:F43C1.2b 4219465 4219523 -1
CDS:F43C1.2b 4219575 4219643 -1
CDS:F43C1.2b 4227891 4228094 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43C1.2b.1 F43C1.2b.1 1335   III: 4217396-4228094